Keklikoglou, Kleoniki, Sarah Faulwetter, Eva Chatzinikolaou, Patricia Wils, Jonathan Brecko, Jiří Kvaček, Brian Metscher, and Christos Arvanitidis. “Micro-computed tomography for natural history specimens: a handbook of best practice protocols.” European Journal of Taxonomy 522 (2019). https://doi.org/10.5852/ejt.2019.522
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Ecology and Evolutionary Biology Museums YouTube Channel, CT Data & Segmentation Tutorial Series
By Ramon Nagesan, University of Michigan Museum of Zoology http://University of Michigan Museum of Zoology YouTube playlist of tutorials that range from introduction to CT Data, MorphoSource, and processing data in VGStudio.
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Spatial Archaeometry Research Collaborations (SPARC) Teaching Resources for microCT (University of Arkansas)
By Manon Wilson, University of Arkansas https://github.com/castuofa/sparc_microct Educational resources including CT Data analysis and visualization focused on the field of archaeology.
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University of Florida DeLeon Lab Data Post-processing Modules
By Valeria DeLeon and Rose Bryson, The University of Florida https://www.youtube.com/@deleonlab/videos Tutorials for analyzing and processing CT data in 3D Slicer.
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Data Processing Basics in VG Studio
By April Neander, The University of Chicago https://youtu.be/oWecQ6AmN2A Chapter 12 of the University of Chicago PaleoCT training course. Covers importing data, navigation, reorientation, cropping, and merging scans in VGStudio.
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SlicerMorph
By SlicerMorph Team, Murat Maga, Adam Summers, and Doug Boyer https://slicermorph.github.io/ Github page for 3D Slicer plugin that streamlines data import, visualization, measurement, annotation, and geometric morphometric analysis on 3D data, including volumetric scans (CTs and MRs) and 3D surface […]
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MICRO Instructions for Working with Image Stacks in FIJI (FIJI Is Just ImageJ)
By Manon Wilson, Paul Gignac, and Claire Terhune from MICRO, University of Arkansas https://micro.uark.edu/micro-instructions-for-working-with-image-stacks-in-fiji-fiji-is-just-imagej/ Tips and tricks for manipulating CT-scanner image stacks using the free software ImageJ.
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The Virtual Paleontologist
By Anne Kort, University of Michigan https://www.youtube.com/@VirtPaleo Comprehensive tutorials about using, processing, and analyzing CT data primarily focused on the field of Paleontology.